Sample adapter_content Sequences flagged as poor quality sequence_duplication_levels avg_sequence_length Encoding kmer_content per_base_sequence_quality sequence_length_distribution Sequence length File type basic_statistics per_sequence_gc_content Total Sequences per_base_n_content per_base_sequence_content overrepresented_sequences %GC total_deduplicated_percentage Filename per_tile_sequence_quality per_sequence_quality_scores CCY3RACXX_l08_n01_FounderF.A1.a warn 0.0 pass 101.0 Sanger / Illumina 1.9 fail fail pass 101.0 Conventional base calls pass warn 11743953.0 warn pass pass 49.0 98.8435132351 CCY3RACXX_l08_n01_FounderF.A1.a.fastq.gz fail pass CCY3RACXX_l08_n01_FounderF.A1.b fail 0.0 pass 101.0 Sanger / Illumina 1.9 fail fail pass 101.0 Conventional base calls pass warn 15833733.0 warn pass pass 49.0 99.1174765488 CCY3RACXX_l08_n01_FounderF.A1.b.fastq.gz fail pass CCY3RACXX_l08_n01_FounderF.B1.a fail 0.0 pass 101.0 Sanger / Illumina 1.9 fail fail pass 101.0 Conventional base calls pass warn 12698409.0 warn pass pass 49.0 98.8067567656 CCY3RACXX_l08_n01_FounderF.B1.a.fastq.gz fail pass CCY3RACXX_l08_n01_FounderF.B1.b fail 0.0 pass 101.0 Sanger / Illumina 1.9 fail fail pass 101.0 Conventional base calls pass warn 11393874.0 warn pass pass 49.0 98.9257915194 CCY3RACXX_l08_n01_FounderF.B1.b.fastq.gz fail pass CCY3RACXX_l08_n01_FounderMale.1 fail 0.0 pass 101.0 Sanger / Illumina 1.9 fail fail pass 101.0 Conventional base calls pass pass 13333740.0 warn warn pass 45.0 99.800982417 CCY3RACXX_l08_n01_FounderMale.1.fastq.gz fail pass CCY3RACXX_l08_n01_QG2987.fGM fail 0.0 pass 101.0 Sanger / Illumina 1.9 fail fail pass 101.0 Conventional base calls pass pass 13570648.0 warn warn pass 46.0 99.7648468806 CCY3RACXX_l08_n01_QG2987.fGM.fastq.gz fail pass CCY3RACXX_l08_n01_QG2987.mGF fail 0.0 pass 101.0 Sanger / Illumina 1.9 fail fail pass 101.0 Conventional base calls pass pass 17452339.0 warn warn pass 45.0 99.7608951644 CCY3RACXX_l08_n01_QG2987.mGF.fastq.gz fail pass CCY3RACXX_l08_n01_QG2990.1fGM fail 0.0 pass 101.0 Sanger / Illumina 1.9 fail fail pass 101.0 Conventional base calls pass pass 17633222.0 warn warn pass 46.0 98.9930491966 CCY3RACXX_l08_n01_QG2990.1fGM.fastq.gz fail pass CCY3RACXX_l08_n01_QG2990.1mGF fail 0.0 pass 101.0 Sanger / Illumina 1.9 fail fail pass 101.0 Conventional base calls pass pass 14573299.0 warn warn pass 45.0 99.7965851538 CCY3RACXX_l08_n01_QG2990.1mGF.fastq.gz fail pass CCY3RACXX_l08_n01_QG2990.2fGM fail 0.0 pass 101.0 Sanger / Illumina 1.9 fail fail pass 101.0 Conventional base calls pass warn 18034862.0 warn pass pass 50.0 98.7877808792 CCY3RACXX_l08_n01_QG2990.2fGM.fastq.gz fail pass CCY3RACXX_l08_n01_QG2990.2mGF fail 0.0 pass 101.0 Sanger / Illumina 1.9 fail fail pass 101.0 Conventional base calls pass pass 16455921.0 warn warn pass 45.0 99.6055858004 CCY3RACXX_l08_n01_QG2990.2mGF.fastq.gz fail pass CCY3RACXX_l08_n01_undetermined pass 0.0 fail 101.0 Sanger / Illumina 1.9 fail fail pass 101.0 Conventional base calls pass warn 14092570.0 warn pass pass 45.0 38.3063717163 CCY3RACXX_l08_n01_undetermined.fastq.gz fail pass CCY3RACXX_l08_n02_FounderF.A1.a warn 0.0 warn 101.0 Sanger / Illumina 1.9 fail fail pass 101.0 Conventional base calls pass warn 11743953.0 fail pass pass 49.0 68.1890099668 CCY3RACXX_l08_n02_FounderF.A1.a.fastq.gz warn pass CCY3RACXX_l08_n02_FounderF.A1.b fail 0.0 warn 101.0 Sanger / Illumina 1.9 fail fail pass 101.0 Conventional base calls pass warn 15833733.0 fail pass pass 49.0 66.4613495515 CCY3RACXX_l08_n02_FounderF.A1.b.fastq.gz warn pass CCY3RACXX_l08_n02_FounderF.B1.a fail 0.0 warn 101.0 Sanger / Illumina 1.9 fail fail pass 101.0 Conventional base calls pass warn 12698409.0 fail pass pass 49.0 65.5486587899 CCY3RACXX_l08_n02_FounderF.B1.a.fastq.gz warn pass CCY3RACXX_l08_n02_FounderF.B1.b fail 0.0 warn 101.0 Sanger / Illumina 1.9 fail fail pass 101.0 Conventional base calls pass warn 11393874.0 fail pass pass 49.0 66.5277321962 CCY3RACXX_l08_n02_FounderF.B1.b.fastq.gz warn pass CCY3RACXX_l08_n02_FounderMale.1 fail 0.0 pass 101.0 Sanger / Illumina 1.9 fail fail pass 101.0 Conventional base calls pass pass 13333740.0 fail warn pass 45.0 88.8170405857 CCY3RACXX_l08_n02_FounderMale.1.fastq.gz warn pass CCY3RACXX_l08_n02_QG2987.fGM fail 0.0 pass 101.0 Sanger / Illumina 1.9 fail fail pass 101.0 Conventional base calls pass pass 13570648.0 fail warn pass 46.0 89.6004705961 CCY3RACXX_l08_n02_QG2987.fGM.fastq.gz pass pass CCY3RACXX_l08_n02_QG2987.mGF fail 0.0 pass 101.0 Sanger / Illumina 1.9 fail fail pass 101.0 Conventional base calls pass pass 17452339.0 fail warn pass 45.0 88.0842537151 CCY3RACXX_l08_n02_QG2987.mGF.fastq.gz warn pass CCY3RACXX_l08_n02_QG2990.1fGM fail 0.0 pass 101.0 Sanger / Illumina 1.9 fail fail pass 101.0 Conventional base calls pass pass 17633222.0 fail pass pass 46.0 87.1687263301 CCY3RACXX_l08_n02_QG2990.1fGM.fastq.gz warn pass CCY3RACXX_l08_n02_QG2990.1mGF fail 0.0 pass 101.0 Sanger / Illumina 1.9 fail fail pass 101.0 Conventional base calls pass pass 14573299.0 fail warn pass 44.0 90.0700990779 CCY3RACXX_l08_n02_QG2990.1mGF.fastq.gz pass pass CCY3RACXX_l08_n02_QG2990.2fGM fail 0.0 warn 101.0 Sanger / Illumina 1.9 fail fail pass 101.0 Conventional base calls pass warn 18034862.0 fail pass pass 50.0 56.8446362971 CCY3RACXX_l08_n02_QG2990.2fGM.fastq.gz warn pass CCY3RACXX_l08_n02_QG2990.2mGF fail 0.0 pass 101.0 Sanger / Illumina 1.9 fail fail pass 101.0 Conventional base calls pass pass 16455921.0 fail warn pass 45.0 81.5681755241 CCY3RACXX_l08_n02_QG2990.2mGF.fastq.gz warn pass CCY3RACXX_l08_n02_undetermined pass 0.0 fail 101.0 Sanger / Illumina 1.9 fail fail pass 101.0 Conventional base calls pass warn 14092570.0 fail pass pass 45.0 19.0716802638 CCY3RACXX_l08_n02_undetermined.fastq.gz pass pass