CCY3RACXX_l08_n02_QG2987.mGF.fastq.gz FastQC Report

Summary

Basic Statistics
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Adapter Content
Kmer Content

Basic Statistics

Measure	Value
Filename	CCY3RACXX_l08_n02_QG2987.mGF.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	17452339
Sequences flagged as poor quality	0
Sequence length	101
%GC	45

Per base sequence quality

Per base quality graph

Per tile sequence quality

Per base quality graph

Per sequence quality scores

Per Sequence quality graph

Per base sequence content

Per base sequence content

Per sequence GC content

Per sequence GC content graph

Per base N content

N content graph

Sequence Length Distribution

Sequence length distribution

Sequence Duplication Levels

Duplication level graph

Overrepresented sequences

No overrepresented sequences

Adapter Content

Adapter graph

Kmer Content

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CATTAAA	24945	0.0	7.4180136	94-95
TCATTAA	27665	0.0	7.344104	94-95
GTATCAT	31840	0.0	6.6512513	94-95
GCCGTAT	37665	0.0	6.5977793	94-95
CGTATCA	33845	0.0	6.3877287	94-95
CGCCGTA	39385	0.0	6.238816	94-95
CCGTATC	38950	0.0	6.2129993	94-95
ATCATTA	31215	0.0	6.173753	94-95
GGTCGCC	53770	0.0	5.832167	94-95
TGGTCGC	55095	0.0	5.6750293	94-95
ATTAAAA	31820	0.0	5.6472545	94-95
GTCGCCG	55385	0.0	5.473227	94-95
TCGCCGT	48275	0.0	5.234711	92-93
TCGGTGG	77925	0.0	5.1102076	94-95
GTGGTCG	60645	0.0	5.1099963	92-93
GGTGGTC	64765	0.0	5.093309	94-95
TATCATT	40095	0.0	5.0444574	92-93
CGGTGGT	67320	0.0	5.0174093	94-95