CCY3RACXX_l08_n02_FounderMale.1.fastq.gz FastQC Report

Summary

Basic Statistics
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Adapter Content
Kmer Content

Basic Statistics

Measure	Value
Filename	CCY3RACXX_l08_n02_FounderMale.1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	13333740
Sequences flagged as poor quality	0
Sequence length	101
%GC	45

Per base sequence quality

Per base quality graph

Per tile sequence quality

Per base quality graph

Per sequence quality scores

Per Sequence quality graph

Per base sequence content

Per base sequence content

Per sequence GC content

Per sequence GC content graph

Per base N content

N content graph

Sequence Length Distribution

Sequence length distribution

Sequence Duplication Levels

Duplication level graph

Overrepresented sequences

No overrepresented sequences

Adapter Content

Adapter graph

Kmer Content

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CATTAAA	19545	0.0	7.4574	94-95
TCATTAA	22100	0.0	7.1001425	94-95
ATCATTA	24510	0.0	6.601178	94-95
GCCGTAT	29490	0.0	6.5269623	94-95
CGTATCA	26600	0.0	6.432084	94-95
GTATCAT	25060	0.0	6.3728137	94-95
CGCCGTA	30915	0.0	6.3313804	94-95
CCGTATC	30185	0.0	5.930005	94-95
ATTAAAA	24285	0.0	5.896552	94-95
GGTCGCC	41385	0.0	5.678894	94-95
TGGTCGC	42455	0.0	5.4426837	94-95
TCGCCGT	37230	0.0	5.2266254	92-93
GTCGCCG	42170	0.0	5.121152	94-95
CGGTGGG	5530	0.0	5.044425	94-95
TTAAAAA	27590	0.0	5.038544	94-95
TATCATT	30975	0.0	5.03578	94-95