FastQCFastQC Report
Tue 17 Dec 2019
CCY3RACXX_l07_n02_DJ57.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameCCY3RACXX_l07_n02_DJ57.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences35
Sequences flagged as poor quality0
Sequence length101
%GC40

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[FAIL]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
NNAATTAAAATAATTTTTTCGATGTTTTCATGTCAAAATTTGGATTTTTC12.857142857142857No Hit
NNGTTCCATCAAACGACTGAAGAATGAAGTGACAAAGTGGCTGATCGATC12.857142857142857No Hit
NNAGAGCGGGAATCCGTCAACTCCCTCGATAAGTCCGGAGCTACACCACT12.857142857142857No Hit
NNAGAAGTATATTCCTCTAACATTGACAATACGTGATCGATCTAGCAAAT12.857142857142857No Hit
NNCATTCTTATGGTACAATAGTGGCGGTTTGCCTAGATTTCCTTTAAAGA12.857142857142857No Hit
NNCTCTCGTTTTATCCTAAGTATCTGCGTCTCTACACAAGTGCATAATAT12.857142857142857No Hit
NNATTTTTTAAAAATTCAAGTTACCCGCCAAAACTTTGATCGATCCTTTA12.857142857142857No Hit
NNCGGTGGTATTCTCGGCTTTGTCATATTTAAATCGGGATACATTTCAAG12.857142857142857No Hit
NNTGCTGATCTGAGAATCTCGACTTTAGGAAGACGTTGATTGATCTCAAG12.857142857142857No Hit
NNTTATGATTTAGACTGTTTCGATACAAGTTTTTGACGAGTGATCGTCTT12.857142857142857No Hit
NNGTCTCTTCTCTTTTTTTTGCATCTTTGGTTGATGACGTTTATCAATAT12.857142857142857No Hit
NNAACCCAACCCAACACTGAACTTCCATCTTGATGACACACTTACGAAGT12.857142857142857No Hit
NNATTCGGTCAATTCAAGTATTCAAGTATTTTTTGTTTTTTTTTTTTCTA12.857142857142857No Hit
NNGCTCTCCGCAAGGCGATTGCCAATGGAGCGCAAAAAATTCAACGAGGA12.857142857142857No Hit
NNTATCATTGACCATATCAACAAGGCCAGCAATATCTCCAAATCCTAGAA12.857142857142857No Hit
NNAGTACCGAACAAAACAAGCATAAGTGATTATTCAAATCCAAAAATACT12.857142857142857No Hit
NNCTAACTTCTTATTAATTTGACATTTAGAAATTTCATTGAATTTTTATT12.857142857142857No Hit
NNAAATGTGAAATGTCTTCCATACTCCCGTTCTCTTCCTGTTCCAAATCC12.857142857142857No Hit
NNAGTAGCGCCACTAGAATAATTGGATTAAACACGCCTATGGTATTACAA12.857142857142857No Hit
NNGATCAAGACCCCAGTACGTGGATCATTTGGAATTGGGACTTCCCATGG12.857142857142857No Hit
NNTCTAATTTCTGTTAATCAGATTTAGGAGGGTGTCAGTTCTTCCATTTC12.857142857142857No Hit
NNTACTATTTCTTAAATCAATTTTTGAGTTCAATAATTATAGGGGAATGT12.857142857142857No Hit
NNACAATGGCAATACTCCTCTCGGTGGTTGGGAAATAGAAAACAAGGAAG12.857142857142857No Hit
NNTTTTAAAGTTTGTAACTTTTTGAAGCATAAACTACTACAGTGTACACA12.857142857142857No Hit
NNCAGAAATAGTGTTCTCGGGTGGGAGGTCGCGCGCGAAAATTGGGGCGT12.857142857142857No Hit
NNCAAATTTTTTGTCGACGAATTCGGAAAATCGGCAAATTGCCGGTTTGC12.857142857142857No Hit
NNGATCGAATACCTAGGCTTGCTGGGATTCCGGAACATCCGCAACTACGC12.857142857142857No Hit
NNATTTTTCGATAATCGAAACGCAAAAAATTACTGACATAAAAAAAAAAC12.857142857142857No Hit
NNGAAAGGAGCACCTCCTCGGAGTTCTTCAGGCTCAGAGCAAGCGCCTCA12.857142857142857No Hit
NNATTTTGATTTAAGCCGATGAACCGCCACTCCAGAATGTCTCTCCGAAT12.857142857142857No Hit
NNTACTTCAAATCCTCCCGATTTTCTCAGGATTTTCTCAAAATTAGCAGC12.857142857142857No Hit
NNTTCCAGGGAAAAACATTGAGAAATACATGCACAAAGTGCGCTCTAGCG12.857142857142857No Hit
NNATTCCCGTCTGGCTCCGCGAGCATCTTCTCGGTGGATTTGCCCGAATG12.857142857142857No Hit
NNTCATGTTTATTATCAGTTTTGTCAGTATTTTCCCACACTTTGCCCTAG12.857142857142857No Hit
NNAGTCTACACAATTTTTGAAACATGGAACGCGAAGGACTTCTCGGTGAC12.857142857142857No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)