FastQCFastQC Report
Tue 17 Dec 2019
CCY3RACXX_l07_n01_DJ57.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameCCY3RACXX_l07_n01_DJ57.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences35
Sequences flagged as poor quality0
Sequence length101
%GC37

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCTATCCGCATCACTGGGGAATAATCTATCGAGATTATTCCACTCCGAG12.857142857142857No Hit
CTGGCTCGAAAATGGTCATTTGTCAGGGAGAAATTGACGAAAAAGGAAAT12.857142857142857No Hit
AGTCTACATTATTCGGAAAGCATAATGTCCACTTGAACCATGCGTCCCTG12.857142857142857No Hit
TGATAATGTTTATTTTTCAATTTATTTCCCCATTATTATAAAATTTATTC12.857142857142857No Hit
CAAACTGGTCTCAGAATGTTTAACACTGCATGTAGATAGATCAATCAGAA12.857142857142857No Hit
GTACCATTTAAAGGCGCAAACATATTTTCAATTAATATAAATTTTTCGTG12.857142857142857No Hit
ATTCGGACACGTTCTTTGCTTCACAACTTCAAAAGCTTCGTTGACTTTCC12.857142857142857No Hit
TCTCAATTTTTGACTCGACTTTTCCGATCGATCAAATTATTTGCCTATTA12.857142857142857No Hit
GTCTCAAGCCAAACGCCTTCTCCTTGACTGCTGACGATCGATTCCAGCTT12.857142857142857No Hit
CCCGCGTTGAGAAGCTGAAAAGATAGGACACTTTAGAAAAGTTGAGAAAG12.857142857142857No Hit
TGTTTTCTAAATCCCATTTTTATAGAACCATCACCTTCAAACTTTACCAT12.857142857142857No Hit
GGGAATGGATTATGGAGAAGATGAGAAACCATTGACTACTGTTGAAACTG12.857142857142857No Hit
CTTCAGATGAATGACGTAGCTGGTGCTCAATCCTCGGCATCTTGGGCTAA12.857142857142857No Hit
TTTTCTGTTTGGACTATCCAGGTTATTTTTGCGAGGGTTTCGAACACAGT12.857142857142857No Hit
ATTGATTTTTCTATATTCAGAATGCGATTTCTTTCCACATATCAAACGGG12.857142857142857No Hit
GTCAATTTTCAGCGGGTAATTTGAATTTTCAGTTAATTTTTGACGGGAAA12.857142857142857No Hit
GGAACAATTCTATAAGTTAAGACAAGGGACGGGTTCTATATAAAATATTA12.857142857142857No Hit
CATTTTGTTGATGTAGTGTGATTATTTTTATTTGTGTTTGTTTATTGATG12.857142857142857No Hit
GATTACATTTTGTCTTGACATTTTAACTCAAATAACGCAAAACAGTGCAG12.857142857142857No Hit
CAAATTGTTTAAAACTAAGTTGTATCACAAACTTTGAACATTTTTACAGA12.857142857142857No Hit
CCGAATTTGCCGAGCTCGGCAAATTTTGAAAAACCAGCAATTGCCGATTT12.857142857142857No Hit
ATTTTTGTAATGCAATCTGAACTTCTCAAAAATTTAAGAGAAGAGGATCA12.857142857142857No Hit
ATTTCCTCAATTTTTGAGAAAAAAAAACTAACAATTCTGTACTAAACTGA12.857142857142857No Hit
GATCTTGGTATTTTCCGACAATTCGTAGTAAACCGGTGCATGTAGTTCAT12.857142857142857No Hit
AGTCTTCAAAAAATGCTTCGCAATTAAGTGAGGCTTTCCGTAAAAATTGT12.857142857142857No Hit
AATATATTTTTAATTTTTGTATAATAAAGATACATTTTTGGATAAACTTG12.857142857142857No Hit
CAAAAATAATGACTAATAAAAAGTGGATCGATCAATGTAAGGGAAATTTG12.857142857142857No Hit
CCACAGAAGCGTTCCATTTTCTAATATTCCTGCTAGCGGCTCAACGCTTC12.857142857142857No Hit
GAAATGTTAGATTACAATCTTTGAATGTACGCCGAGAAAAAAAATGCGAA12.857142857142857No Hit
AGCGTCGGAGTGTAATAAGGACACGAGCGGCGAAGGAGCGGTGGCCCCCG12.857142857142857No Hit
GAAAATATGTTGTTTCAAAAAATTATCCAGACGCAAACTTAGATTTTTGG12.857142857142857No Hit
CAGGAAACTCGTTACCAATAATATCAGAGTGATCCTTTATCGTTTTGAAA12.857142857142857No Hit
GACAAAAAGACGCGGAAAACAATAGGTTCAAAAGGTGTGTGTGTGTTCGT12.857142857142857No Hit
AGCAACGTTTATACTTTCAGAAACGCCAAACAGTCGACGAGGACGCACTA12.857142857142857No Hit
ATTCATGAATCCCTCTGGATCGATCTTGACTTTCTGCCCATTACCGGAGT12.857142857142857No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)