Sample adapter_content Sequences flagged as poor quality sequence_duplication_levels avg_sequence_length Encoding kmer_content per_base_sequence_quality sequence_length_distribution Sequence length File type basic_statistics per_sequence_gc_content Total Sequences per_base_n_content per_base_sequence_content overrepresented_sequences %GC total_deduplicated_percentage Filename per_tile_sequence_quality per_sequence_quality_scores CCY3RACXX_l01_n01_AZU15-S-R2 fail 0.0 pass 101.0 Sanger / Illumina 1.9 fail fail pass 101.0 Conventional base calls pass warn 19902500.0 pass warn pass 47.0 85.3879680805 CCY3RACXX_l01_n01_AZU15-S-R2.fastq.gz fail pass CCY3RACXX_l01_n01_AZU15-W-R2 fail 0.0 pass 101.0 Sanger / Illumina 1.9 fail fail pass 101.0 Conventional base calls pass warn 16468319.0 pass warn pass 45.0 83.5765113918 CCY3RACXX_l01_n01_AZU15-W-R2.fastq.gz fail pass CCY3RACXX_l01_n01_AZU180-S-R2 fail 0.0 pass 101.0 Sanger / Illumina 1.9 fail fail pass 101.0 Conventional base calls pass warn 11457320.0 pass warn pass 46.0 87.6971096366 CCY3RACXX_l01_n01_AZU180-S-R2.fastq.gz fail pass CCY3RACXX_l01_n01_AZU180-W-R2 fail 0.0 pass 101.0 Sanger / Illumina 1.9 fail fail pass 101.0 Conventional base calls pass warn 13055608.0 pass warn pass 47.0 88.4807226167 CCY3RACXX_l01_n01_AZU180-W-R2.fastq.gz fail pass CCY3RACXX_l01_n01_AZU5D-S-R2 fail 0.0 pass 101.0 Sanger / Illumina 1.9 fail fail pass 101.0 Conventional base calls pass warn 9941084.0 pass warn pass 45.0 85.2179456292 CCY3RACXX_l01_n01_AZU5D-S-R2.fastq.gz fail pass CCY3RACXX_l01_n01_AZU5D-W-R2 fail 0.0 pass 101.0 Sanger / Illumina 1.9 fail fail pass 101.0 Conventional base calls pass warn 18718085.0 pass warn pass 45.0 81.5905466399 CCY3RACXX_l01_n01_AZU5D-W-R2.fastq.gz fail pass CCY3RACXX_l01_n01_AZU60-S-R2 fail 0.0 pass 101.0 Sanger / Illumina 1.9 fail fail pass 101.0 Conventional base calls pass warn 18973830.0 pass warn pass 45.0 83.3964499101 CCY3RACXX_l01_n01_AZU60-S-R2.fastq.gz fail pass CCY3RACXX_l01_n01_AZU60-W-R2 fail 0.0 pass 101.0 Sanger / Illumina 1.9 fail fail pass 101.0 Conventional base calls pass warn 12893757.0 pass warn pass 46.0 84.4615628202 CCY3RACXX_l01_n01_AZU60-W-R2.fastq.gz fail pass CCY3RACXX_l01_n01_NON15-W-R2 fail 0.0 pass 101.0 Sanger / Illumina 1.9 fail fail pass 101.0 Conventional base calls pass warn 22104567.0 pass warn pass 46.0 84.0288145222 CCY3RACXX_l01_n01_NON15-W-R2.fastq.gz fail pass CCY3RACXX_l01_n01_NON180-W-R2 fail 0.0 pass 101.0 Sanger / Illumina 1.9 fail fail pass 101.0 Conventional base calls pass warn 13837417.0 pass warn pass 48.0 89.3048595474 CCY3RACXX_l01_n01_NON180-W-R2.fastq.gz fail pass CCY3RACXX_l01_n01_NON60-W-R2 fail 0.0 pass 101.0 Sanger / Illumina 1.9 fail fail pass 101.0 Conventional base calls pass warn 17049830.0 pass warn pass 47.0 87.3334364328 CCY3RACXX_l01_n01_NON60-W-R2.fastq.gz fail pass CCY3RACXX_l01_n01_undetermined pass 0.0 fail 101.0 Sanger / Illumina 1.9 fail fail pass 101.0 Conventional base calls pass warn 13965507.0 pass pass pass 45.0 36.9143752447 CCY3RACXX_l01_n01_undetermined.fastq.gz fail pass CCY3RACXX_l01_n02_AZU15-S-R2 fail 0.0 warn 101.0 Sanger / Illumina 1.9 fail fail pass 101.0 Conventional base calls pass warn 19902500.0 fail warn warn 47.0 55.1646883092 CCY3RACXX_l01_n02_AZU15-S-R2.fastq.gz fail pass CCY3RACXX_l01_n02_AZU15-W-R2 fail 0.0 fail 101.0 Sanger / Illumina 1.9 fail fail pass 101.0 Conventional base calls pass fail 16468319.0 fail warn warn 45.0 49.1736899463 CCY3RACXX_l01_n02_AZU15-W-R2.fastq.gz fail pass CCY3RACXX_l01_n02_AZU180-S-R2 fail 0.0 warn 101.0 Sanger / Illumina 1.9 fail fail pass 101.0 Conventional base calls pass warn 11457320.0 fail warn warn 46.0 56.9807645648 CCY3RACXX_l01_n02_AZU180-S-R2.fastq.gz fail pass CCY3RACXX_l01_n02_AZU180-W-R2 fail 0.0 warn 101.0 Sanger / Illumina 1.9 fail fail pass 101.0 Conventional base calls pass fail 13055608.0 fail warn warn 47.0 60.7716126193 CCY3RACXX_l01_n02_AZU180-W-R2.fastq.gz fail pass CCY3RACXX_l01_n02_AZU5D-S-R2 fail 0.0 warn 101.0 Sanger / Illumina 1.9 fail fail pass 101.0 Conventional base calls pass warn 9941084.0 fail warn warn 45.0 52.3602270034 CCY3RACXX_l01_n02_AZU5D-S-R2.fastq.gz fail pass CCY3RACXX_l01_n02_AZU5D-W-R2 fail 0.0 fail 101.0 Sanger / Illumina 1.9 fail fail pass 101.0 Conventional base calls pass fail 18718085.0 fail warn warn 45.0 44.1301558599 CCY3RACXX_l01_n02_AZU5D-W-R2.fastq.gz fail pass CCY3RACXX_l01_n02_AZU60-S-R2 fail 0.0 fail 101.0 Sanger / Illumina 1.9 fail fail pass 101.0 Conventional base calls pass warn 18973830.0 fail warn warn 45.0 49.5925316786 CCY3RACXX_l01_n02_AZU60-S-R2.fastq.gz fail pass CCY3RACXX_l01_n02_AZU60-W-R2 fail 0.0 warn 101.0 Sanger / Illumina 1.9 fail fail pass 101.0 Conventional base calls pass warn 12893757.0 fail warn warn 46.0 52.6392279898 CCY3RACXX_l01_n02_AZU60-W-R2.fastq.gz fail pass CCY3RACXX_l01_n02_NON15-W-R2 fail 0.0 warn 101.0 Sanger / Illumina 1.9 fail fail pass 101.0 Conventional base calls pass warn 22104567.0 fail warn warn 46.0 52.8587925195 CCY3RACXX_l01_n02_NON15-W-R2.fastq.gz fail pass CCY3RACXX_l01_n02_NON180-W-R2 fail 0.0 warn 101.0 Sanger / Illumina 1.9 fail fail pass 101.0 Conventional base calls pass warn 13837417.0 fail warn warn 48.0 61.4006176749 CCY3RACXX_l01_n02_NON180-W-R2.fastq.gz fail pass CCY3RACXX_l01_n02_NON60-W-R2 fail 0.0 warn 101.0 Sanger / Illumina 1.9 fail fail pass 101.0 Conventional base calls pass warn 17049830.0 fail warn warn 47.0 58.383316783 CCY3RACXX_l01_n02_NON60-W-R2.fastq.gz fail pass CCY3RACXX_l01_n02_undetermined pass 0.0 fail 101.0 Sanger / Illumina 1.9 fail fail pass 101.0 Conventional base calls pass fail 13965507.0 fail warn warn 45.0 17.2001812638 CCY3RACXX_l01_n02_undetermined.fastq.gz fail pass