CCWEBACXX_l07_n01_C2W4.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	CCWEBACXX_l07_n01_C2W4.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	25799104
Sequences flagged as poor quality	0
Sequence length	51
%GC	51

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCCGTCCGCATCTCGTATG	491071	1.9034420730270323	TruSeq Adapter, Index 16 (97% over 39bp)

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCGTATG	55720	42.34435	45
CTCGTAT	58265	41.44459	44
GTCCGCA	66360	40.327732	36
TCTCGTA	60415	39.764954	43
CGCATCT	65665	39.695698	39
TCCGCAT	67355	39.26098	37
ACCCGTC	69150	39.08465	32
CCGTCCG	69470	38.911015	34
ACGTCTG	70960	38.735394	15
CGTCTGA	71025	38.68094	16
CCGCATC	69070	38.269848	38
CCCGTCC	70920	38.120255	33
CGTCCGC	71040	38.079582	35
TCACCCG	71155	38.035027	30
ATCGGAA	73000	37.698235	2
GTCACCC	71915	37.661957	29
CACGTCT	73315	37.543312	14
ATCTCGT	65370	37.525185	42
CACACGT	73360	37.46822	12
TCGGAAG	73460	37.452984	3