FastQCFastQC Report
Tue 5 Dec 2017
CBN9DACXX_l05n02.332000000aadf9.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameCBN9DACXX_l05n02.332000000aadf9.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences189591343
Sequences flagged as poor quality0
Sequence length8
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGCGATAC5873071630.97753044557525No Hit
GAATTCCA4397385423.194019992779943Illumina Small RNA Adapter 2 (100% over 8bp)
TTTACATG3814944420.121933520983603No Hit
ACGCGGGT3794730920.015317366046613No Hit
TTACATGA1973780.10410707412943428No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.2)