FastQCFastQC Report
Tue 21 Nov 2017
CAWVTACXX_l06n02_osat_98.352000000a8c1a.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameCAWVTACXX_l06n02_osat_98.352000000a8c1a.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences20674542
Sequences flagged as poor quality0
Sequence length101
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTATAGG136950.022.9623071
TATACTG146500.020.8202695
CTATACT193050.020.6233864
CCTATAC147550.019.0612073
TTATACT209900.018.5603924
TATAGGG139200.018.087622
TAATACT203800.018.0435734
ATACTGT141450.017.7681266
GTATTAT186650.017.5352041
TATACCG67850.017.4356615
ACTGTGC104700.016.8804958
GTATAAT182600.016.7534661
TAGACTG70950.016.673855
ATTATAC180550.016.5508793
TATACAG140150.016.3735545
TACACTG102550.015.7982025
GTATTAC105200.015.7138671
GTATAAG109000.015.6018511
GTATAGA126100.015.4826871
ATAATAC169100.015.2554193
Produced by FastQC (version 0.11.2)