FastQCFastQC Report
Tue 21 Nov 2017
CAWVTACXX_l06n02_osat_64.352000000a8b85.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameCAWVTACXX_l06n02_osat_64.352000000a8b85.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences34621990
Sequences flagged as poor quality0
Sequence length101
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTATAGG229550.021.438571
CTATACT300000.020.0803344
CCTATAC232650.019.4193523
TATACTG224700.019.2615035
TTATACT310250.016.4002574
GTATTAT284850.016.1425631
TATAGGG215150.015.74299052
GTATATA590800.015.6464471
ACTGTGC158900.015.3379868
TATACTA437500.015.2679985
TATACAG218600.015.2350095
CCCTATA218200.015.2181382
TATACCG111800.015.17054755
TAATACT320400.015.0355194
TAGACTG118850.014.9901835
GTATTAG176500.014.8831131
TCTATAC192250.014.7771983
ATTATAC282500.014.6472793
GTATTGG225750.014.6241431
GTATAAG177350.014.4903691
Produced by FastQC (version 0.11.2)