FastQCFastQC Report
Tue 21 Nov 2017
CAWVTACXX_l06n02_obar_23.352000000a8a50.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameCAWVTACXX_l06n02_obar_23.352000000a8a50.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences42493155
Sequences flagged as poor quality0
Sequence length101
%GC43

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGTCGCC996100.019.36421694-95
CGCCGTA280100.019.2380694-95
TGGTCGC1063750.017.77999194-95
TCTCGGG565150.017.71645294-95
CGGTGGG643800.016.91329694-95
GCCGTAT218650.015.955564594-95
GTCGCCG992800.015.79977594-95
GTGGTCG1334450.015.20721294-95
TATACCG95000.014.8032585
GTATTGG282600.014.4557421
GTATAGG128200.014.4507591
GTATAAG164250.014.228981
GGGCGCC334800.013.981091594-95
GTATTAG173750.013.5876911
TCGCCGT509350.013.39084594-95
GTATATA462300.013.36803151
GTATTAT280350.013.2162461
TGGGCGC299450.013.20473894-95
GGTGGTC1570350.013.13449194-95
GTATAGA197050.013.0658261
Produced by FastQC (version 0.11.2)