FastQCFastQC Report
Tue 21 Nov 2017
CAWVTACXX_l06n01_osat_95.351000000a8bf2.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameCAWVTACXX_l06n01_osat_95.351000000a8bf2.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences53348752
Sequences flagged as poor quality0
Sequence length101
%GC44

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATACTG337550.018.2567525
TATACCG161550.016.3359535
TAATACT461050.016.1973364
TTATACT452100.016.1204664
CTATACT347350.015.8759854
TATACAG314700.015.795135
GTATTAT419500.015.6332071
ATAATAC405850.015.4781113
GTATATA768000.015.3777631
GTATAGG225250.015.2761831
ATTATAC396000.014.86560253
GTATAAT406150.014.5120891
GTATAAG239950.014.3631931
ACTGTGC232000.014.229158
ATACTGT356350.014.1480456
CCTATAC224500.013.9784073
TCTATAC278300.013.8389113
GTATAGA287700.013.7533191
TAGACTG171950.013.6975975
GTATTAG260450.013.6119471
Produced by FastQC (version 0.11.2)