FastQCFastQC Report
Tue 21 Nov 2017
CAWVTACXX_l06n01_osat_64.351000000a8b88.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameCAWVTACXX_l06n01_osat_64.351000000a8b88.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences34621990
Sequences flagged as poor quality0
Sequence length101
%GC44

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTATAGG213850.022.5130421
CTATACT295450.019.56134
CCTATAC228550.019.1397113
TATACTG228050.018.5199855
TATACCG118250.017.5983055
TATAGGG207250.016.7160382
TTATACT313550.016.5617434
CCCTATA214100.016.0276012
TAATACT329150.015.575644
GTATTAT286000.015.568221
GTATATA574050.015.5317281
TATACTA447150.015.4848545
ACTGTGC164600.015.1712538
ATTATAC274950.014.9527563
TAGACTG113150.014.6714095
GTATTAG179050.014.5468251
TATACAG218200.014.54410655
GTATAAG167550.014.4980051
ATAATAC278050.014.4508973
ATACTGT229650.014.2719776
Produced by FastQC (version 0.11.2)