FastQCFastQC Report
Tue 21 Nov 2017
CAWVTACXX_l06n01_osat_61_1.351000000a8b1e.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameCAWVTACXX_l06n01_osat_61_1.351000000a8b1e.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8241196
Sequences flagged as poor quality0
Sequence length101
%GC42

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATACTG54550.021.9372335
GTATAGG48000.021.3114091
CTATACT78100.021.1363744
TAGACTG27450.019.9881115
ACAGTGC41750.019.8257568
CTACACT39800.019.609074
ATACTGT56750.019.2530526
ACTGTGC40350.018.8725478
CCTATAC55100.018.8567813
TATACCG26500.018.5628035
TAATACT92750.018.4098154
CTGTGCG20700.018.279659
GACTGTG23750.017.9236767
CAGTGCA54800.017.6075049
AGACTGT26450.017.5248326
TACTGTG44600.016.9681057
ACTGTGT47400.016.764068
TACACTG39300.016.7293245
TTATACT88200.016.4100154
TATAGGG47100.016.1382472
Produced by FastQC (version 0.11.2)