FastQCFastQC Report
Tue 21 Nov 2017
CAWVTACXX_l06n01_osat_213.351000000a8c87.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameCAWVTACXX_l06n01_osat_213.351000000a8c87.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences64552193
Sequences flagged as poor quality0
Sequence length101
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATACTG394650.016.9817245
GTATAGG289850.015.2725361
GTATTGG544600.015.1992641
CTATACT395850.015.1616084
TAGACTG217950.014.9298545
TATACAG394700.014.8706055
CCTATAC287400.014.825773
TATACCG220200.014.7558235
GTATAAG278100.014.51736451
GTATATA849400.014.4530261
ACTGTGC298050.014.1386818
GTATAGA333800.014.0997661
GTATTAG288350.014.0013141
TCTATAC309700.013.9175993
TAATACT474150.013.8149174
ATAATAC437050.013.7895343
TAGACAG237800.013.7830525
TACACAG290200.013.52715
GTATTAT442150.013.5228381
TACACTG323750.013.4693045
Produced by FastQC (version 0.11.2)