FastQCFastQC Report
Tue 21 Nov 2017
CAWVTACXX_l05n02_ogla_34.352000000a8b42.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameCAWVTACXX_l05n02_ogla_34.352000000a8b42.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences39021839
Sequences flagged as poor quality0
Sequence length101
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATACTG246100.016.757125
GTATTGG338100.015.4420851
GTATAGG169350.015.2884951
GTATAAG184800.014.8329421
TATACCG133400.014.3885435
TAGACTG124950.014.372985
TACACTG176050.014.2761445
GTGTAGG168850.014.0114061
GTCTAGG145200.013.8724341
CCTATAC174950.013.8497863
GTATATA545700.013.780991
TAGACAG140300.013.6470465
CTATACT253950.013.6386254
TATACAG228300.013.6309675
TACACCG131050.013.2326595
ACTGTGC178450.013.1502948
ACAGTGC194700.013.1018728
CCTAGAC128350.013.0296763
TACACAG172550.012.9687235
TCTATAC202200.012.923153
Produced by FastQC (version 0.11.2)