FastQCFastQC Report
Tue 21 Nov 2017
CAWVTACXX_l05n01_ogla_36.351000000a8c2a.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameCAWVTACXX_l05n01_ogla_36.351000000a8c2a.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17535705
Sequences flagged as poor quality0
Sequence length101
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATACTG111050.014.2890265
GTATAAG87650.013.9358791
GTGTAGG67900.013.2295531
GTATAGG78150.013.1972661
GTATTGG158700.012.9677351
TATACCG56950.012.5967355
CTATACT122250.012.3196274
TAGACTG52450.012.1376345
GTATATA266600.012.1227711
TCTATAC100800.012.0661263
ACTGTGC73600.012.0037178
TATACAG103950.011.9286355
CCTATAC76750.011.6996223
TACACCG52800.011.6072825
GTATTAT147450.011.2172811
GTGTATG112350.011.1682211
GTATAGA101350.011.1610831
CCTAGAC58350.010.9921163
GTATTAG97800.010.9830441
TACACTG73500.010.923815
Produced by FastQC (version 0.11.2)