FastQCFastQC Report
Tue 21 Nov 2017
CAWVTACXX_l03n01_g9.351000000a8b52.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameCAWVTACXX_l03n01_g9.351000000a8b52.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences31934844
Sequences flagged as poor quality0
Sequence length101
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[WARN]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATACTG164200.014.6961125
TATACAG161100.014.0943235
GTATTGG246900.014.069331
TAGACTG104050.014.061145
GTATATA359800.013.4186771
GTATAGG116500.013.2974631
CTATACT163050.013.1100074
GTCTATA124900.012.9738571
TACACTG142000.012.9459675
TATACCG99350.012.861645
TTATACT201300.012.5067174
TACACCG122750.012.4995075
ATTATAC185850.012.4982153
GTACAGG132400.012.4183891
TACACAG137150.012.3993555
GTATAAG114950.012.2779161
GTGTAGG125900.012.1159221
TAATACT208750.012.105884
ACTGTGC146000.012.0382168
GTATTAC133750.011.9377551
Produced by FastQC (version 0.11.2)