FastQCFastQC Report
Tue 21 Nov 2017
CAWVTACXX_l03n01_g6.351000000a8a6f.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameCAWVTACXX_l03n01_g6.351000000a8a6f.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences44304512
Sequences flagged as poor quality0
Sequence length101
%GC43

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[WARN]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTATTGG514000.017.557111
TATACTG214250.016.2960265
TAGACTG126400.015.8967575
TATTGGG527050.015.2493732
TGCGTTC415700.014.6833499
GGTGCGT446500.014.0643397
TACACCG131200.013.75830655
GTATAAG177200.013.7040321
ATTGGGT561650.013.6756563
GTATATA566000.013.6351781
TACACTG151450.013.424245
GTGCGTT466750.013.3931248
CTATACT238700.013.3929554
GTATAGG144750.013.3290351
GTGTAGG141950.013.2571761
GTATAGA238050.013.1156071
TTGGGTG563850.012.881244
GGACCGT107450.012.8205396
CCTAGAC121500.012.7451593
GTACAGG130100.012.7113931
Produced by FastQC (version 0.11.2)