FastQCFastQC Report
Tue 21 Nov 2017
CAWVTACXX_l02n02_g1.352000000a8c0d.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameCAWVTACXX_l02n02_g1.352000000a8c0d.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences37229412
Sequences flagged as poor quality0
Sequence length101
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[WARN]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTATAGG145300.015.1687651
TATACTG208300.015.1441925
TAGACTG123900.015.0691435
GTATTGG268600.014.3244141
GTCTATA163450.014.0365391
TACACTG159750.013.9475935
CCTATAC147800.013.7551923
GTATAAG148150.013.4662151
TACACCG137850.013.3718745
TATACCG114000.013.2105755
CTATACT206500.013.1595834
GTATATA472950.013.1368261
GTGTAGG164150.013.1085661
GTACAGG154150.012.9112521
GTACCGT98500.012.8295716
ACTGCGC95300.012.811678
TACACAG170950.012.7836845
TAGACAG121150.012.6269875
TATACAG205250.012.4990755
CCTAGAC114650.012.3049453
Produced by FastQC (version 0.11.2)