FastQCFastQC Report
Tue 21 Nov 2017
CAWVTACXX_l02n01_r9.351000000a8b2b.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameCAWVTACXX_l02n01_r9.351000000a8b2b.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences35914158
Sequences flagged as poor quality0
Sequence length101
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[WARN]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTATAGG185800.020.9711021
CTATACT255250.019.1482544
CCTATAC201800.019.0417523
TATACTG206650.017.4236345
CCCTATA186750.015.7438012
TAGACTG117300.015.5502775
TACACTG167400.015.266235
GTATTGG205850.014.9581271
GTGTAGG153050.014.9025651
TATAGGG185650.014.5322522
TACACAG157800.014.3888415
TATACTA346500.014.0790115
TATACAG203800.013.7515855
ACTGTGC159900.013.66498
TACACCG122500.013.6105595
TATACCG108950.013.384935
TAGACAG121000.013.2296855
GTATATA441350.013.1565251
CCTACAC152950.013.1362213
GTATAGA179700.012.9304571
Produced by FastQC (version 0.11.2)