FastQCFastQC Report
Tue 21 Nov 2017
CAWVTACXX_l02n01_r10.351000000a8b95.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameCAWVTACXX_l02n01_r10.351000000a8b95.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences36983899
Sequences flagged as poor quality0
Sequence length101
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[WARN]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTATAGG189450.017.3059841
CCTATAC187750.016.7220273
CTATACT240400.016.6160934
TATACTG204350.015.8756975
TAGACTG119950.015.00815
TACACCG131650.014.5041395
ACTGTGC162400.014.0975318
TACACTG170050.013.9662615
TATACAG209350.013.9536855
TATACCG115800.013.6180935
GTATATA458450.013.5568111
GTATAAG155550.013.3796851
GTGTAGG163450.013.2562821
CTACACT177400.013.2263714
TACACAG161650.013.2228045
TATACTA327400.013.2022955
TAGACAG129950.013.1952515
GTATAGA183050.012.8232771
CTACACC201750.012.7836144
TATAGGG176950.012.4815862
Produced by FastQC (version 0.11.2)