FastQCFastQC Report
Tue 21 Nov 2017
CAWVTACXX_l02n01_g4.351000000a8d43.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameCAWVTACXX_l02n01_g4.351000000a8d43.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences42106442
Sequences flagged as poor quality0
Sequence length101
%GC50

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[WARN]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTATTGG410300.015.7150981
TAGACTG111650.014.50758655
TATTGGG413550.013.8744322
TATACTG186450.013.3750815
GTATAAG133200.012.984821
TATACAG179300.012.9282285
GTATAGG137900.012.7145471
ATTGGGT422200.012.543913
TACACCG184200.012.4811695
TACACTG155750.012.4736845
GTATATA407300.012.1793721
TATACCG145700.012.030025
TGCGTTC373200.011.7222459
GTATTAC151650.011.593061
GTGTAGG168600.011.4421391
CTACACC275000.011.4340914
GTATAGA185300.011.4109921
GTATATG255100.011.3993421
GTATTAG148000.011.3652861
CTATACT186600.011.3272554
Produced by FastQC (version 0.11.2)