FastQCFastQC Report
Tue 21 Nov 2017
CAWVTACXX_l02n01_g2.351000000a8c51.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameCAWVTACXX_l02n01_g2.351000000a8c51.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences36404559
Sequences flagged as poor quality0
Sequence length101
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[WARN]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAGACTG115350.016.8010185
GTATTGG294350.015.9975091
TATACTG199950.015.5601195
TACACCG135650.015.0571125
TATACAG190000.014.399985
GTATAGG137300.013.8430631
TATACCG123250.013.835685
GTGTAGG147700.013.6726031
TACACTG156150.013.5366455
TACACAG162600.013.496295
ACTGTGC153650.013.4475678
TATTGGG304750.013.2323952
GTCTAGG109750.013.11841
GTGTAGA170850.013.04369451
TATAGAC163650.013.0318133
GTATATA438200.012.903791
GTATAAG135550.012.8649861
CTATACT196150.012.6644594
CCTATAC135050.012.6614213
TAGACAG108450.012.3950955
Produced by FastQC (version 0.11.2)