FastQCFastQC Report
Tue 21 Nov 2017
CAWVTACXX_l02n01_g1.351000000a8c00.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameCAWVTACXX_l02n01_g1.351000000a8c00.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences37229412
Sequences flagged as poor quality0
Sequence length101
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[WARN]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATACTG212450.016.25455
TAGACTG125400.015.9470555
GTATTGG278550.015.7110091
GTATAGG149400.015.043821
TACACCG132800.014.843835
TATACAG200200.014.6866425
TATACCG110250.013.9592575
CCTATAC150450.013.9541453
TACACTG166800.013.9254355
CTATACT211300.013.599694
GTCTATA166550.013.5232571
ACTGTGC168050.013.3976548
TATTGGG300000.013.2993742
CCTACAC151850.013.1060683
TACACAG164550.013.0477765
GTATAAG150150.013.0382571
GTACCGT100100.012.9545286
GTGTAGG156400.012.790661
GTATTAG166150.012.5262591
CTACACC201550.012.4901094
Produced by FastQC (version 0.11.2)