FastQCFastQC Report
Tue 21 Nov 2017
CAWVTACXX_l01n02_r7.352000000a8d33.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameCAWVTACXX_l01n02_r7.352000000a8d33.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences26
Sequences flagged as poor quality0
Sequence length101
%GC48

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCGTAGGACGGAGGAGGAGATGAGAAAAACAAGAACACTTCCAGCTCTGA13.8461538461538463No Hit
CTTTAATATCACAAGGTAACTCCCACCCCAGAATGTAGAAAGTACACCAG13.8461538461538463No Hit
GCTCCATCCTCTTTGGATGTTGAGCATCCGCGCCCTCTCCCGGCTCCCAT13.8461538461538463No Hit
TCACTGTGCCGGTGTACTATCTCCCCGAGCCACAGCGGAGGGAGCGGTCG13.8461538461538463No Hit
GCTGAGATTAGCCGAACGTTAGGAGCGCAGAGATATTGAAGCCACAATCC13.8461538461538463No Hit
CACCCGGAGTCATTGTAATCTATCAATCTATCGATCAATAATACTCTCGG13.8461538461538463No Hit
GCCCTCGGAAGCTAGATGTCGCTCCTCACTGCATATCTTACTGGCCAACA13.8461538461538463No Hit
GAAACCTCCTGATCACAGGACCCGGAACTTCTGGTCAAATGACCAGACAA13.8461538461538463No Hit
CCTCTGCGATGTACATCTCGGAGCCGCGCCCAACGAGATGGACGACCCGG13.8461538461538463No Hit
CGAGAGGATATATTCTCGGGGGGCAAAATCTACTTGGCCATTATTTTGTC13.8461538461538463No Hit
AGCTTAGATACGCCTTCAACTGGGTGAGGGCATTTTCAGCTTCCTCCGTC13.8461538461538463No Hit
GTGCGGAATTGGCTTGACCCATGGTCGTTGAAGCGACGATCGACGACGAC13.8461538461538463No Hit
GTGCCAAATAGAGCCATATTGAATATCAAACAACAACAAAAAAGACTATA13.8461538461538463No Hit
GGCTTAAAGGCAAGATCATCTATTAGTTTTGAGTCAAGGTCATCATTCCT13.8461538461538463No Hit
GCTTAGATACGCCTTCAACTGGGTGAGGGCATTTTCAGCTTCCTCCGTCC13.8461538461538463No Hit
CGAGAAGCTTGCCCGCAGGTACACCGAACACGTACTTATCGGGGTTCAGT13.8461538461538463No Hit
CAGCAGTCAAGGCAACAAAAAGAATTTAAATGACCCCCTTCAATCCACAG13.8461538461538463No Hit
AGGTGGTGATCTCGGTGATGGGCGGCGCCAGCATCCTCGACCAGCTCGGC13.8461538461538463No Hit
GCGTACACGTGGCAGTCCAGTCACTAATAGTAGCAACCTTCCCCTTCCCC13.8461538461538463No Hit
GCTCTACATGTCCAAGTGACTAACAACGATCATGACCGACAACACGGCGA13.8461538461538463No Hit
TCTATATATGTCCCGACTGATGCCACAAGTTGCACATCTGGTTCTGCCAA13.8461538461538463No Hit
GCCTCATCATCATCGCCATCAGAGGGAATAATCTCGGTGTCGCCGGAGTG13.8461538461538463No Hit
TTACATCGCCGGAAAGTAAAGCTACCGGCGAAAAGCCTACACTGTTTGTG13.8461538461538463No Hit
GTCTTTGATTTCTTGCCAAGACAATTCCCCAAGAAATGGAGTCCCACACT13.8461538461538463No Hit
AGAGGATCCGGAACTTCCGGATAAACAGACGGAGTAGGCAGCAAGCAGCA13.8461538461538463No Hit
CTTAAAGGCTATGTGAGGAACAAAGCGTGCCCAGAAGGTTCAATAGCAGA13.8461538461538463No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.2)