FastQCFastQC Report
Tue 21 Nov 2017
CAWVTACXX_l01n01_r7.351000000a8d36.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameCAWVTACXX_l01n01_r7.351000000a8d36.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences26
Sequences flagged as poor quality0
Sequence length101
%GC47

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCAGATTGTTGACTCCACTGCGGGGTGCGACCTTTTGTGTTTTCTAGA27.6923076923076925No Hit
GCTTATTATAGCTTTAGGATTAGGTACTACCTTACCCCTCCTCCGGTGCG13.8461538461538463No Hit
CTTGCATAGTGCGCGCGACGCACGCACGGATTCGGACTCGGAGAGATTTG13.8461538461538463No Hit
ATCAACAAGAGCCTTGTACTCGTCGATCATTGCTGCTCGCCAGTTTGGAT13.8461538461538463No Hit
GGTGAATTTCATCATGCGGCGCAAGCATGAGCGTGTACTACGTACCTCTG13.8461538461538463No Hit
ATGAGATGCGGGCATGCCAGTCAGTTTAATCTTGCAACTGACAAGATTTG13.8461538461538463No Hit
GTATCCGTACTTGGGGATGCGGTCAATCTTATAATTCTTTGGCACAAGAA13.8461538461538463No Hit
GCAAGGATGTCTCTGACATTTCTGATGATGAGGAGTTTGTTGATCCTTTT13.8461538461538463No Hit
TTTGAGGCTTATGAGGCAGCCCGCAACATTGCCGGTGAAGGTCCATCCAC13.8461538461538463No Hit
GAAGCAAGCTGGATCACATCAAGAAGCATTAGCTTCGTACCGACGCGGTC13.8461538461538463No Hit
CACCTACTCCGATGATGATGTTGATGATGATGATGAGGGTGACACAGAGG13.8461538461538463No Hit
GCCCAACGGTTGACCAATGCCACCAGCAGCACCGAGAACTGCCACTTTGT13.8461538461538463No Hit
CTAGCTAAGAATGTCTAGCGAACTTAGCCAATTTATAGTGACAAAATAAT13.8461538461538463No Hit
GCGTGATATAGGCCATAGCCGCCTCCACACAAACACACAGCCAGCCGATC13.8461538461538463No Hit
GAAGGCAAGAGACCCTTGTAATTTCCAAAAATATTCTAGATGGGAAACGA13.8461538461538463No Hit
TGGCTAGGGAGGATGAGGAAAAAACTGCGTTTATTACCCCCATAGGAACC13.8461538461538463No Hit
CTAGTATTTTTACCATACTACTACACAACCAGAAATGCAGATGTGCTGTG13.8461538461538463No Hit
CTATGGTATAGGTTAAAGATGAAAAGGTTTTAATTTGTTCTCAGATTTTA13.8461538461538463No Hit
TTGCTAGTAGTGAGGGTCCCTCTGGCACTTCTCGTTTCTTCAATGAGGAG13.8461538461538463No Hit
ACTTAGATATGTTATGTAGTAACAATGTAGTTTACTTTGTAGTAACAAAC13.8461538461538463No Hit
GAATATAGGTCGTCAGCAATCCTGGATTCCAGCCTCTCCGTTGAGCATTG13.8461538461538463No Hit
ATCAAGACAAGTTAAATAAAGTACCAGAGTATCTTAGCCGATTACAAAAT13.8461538461538463No Hit
CAGGTACACAATGCAGACACCACAGAAGAAGCCCAGTGCCCATGTCTTGC13.8461538461538463No Hit
GTGCGACGCAGTTTCACCACCAGATCGTCGCTTGCACGAAGCAGCGCGCT13.8461538461538463No Hit
CATTAGCTTCGTACCGACGCGGTCTTCTCAGCCAATGGAATCTTGACGAT13.8461538461538463No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.2)