CA4RDACXX_l07n02_input_root_ctrl_rep1_pol-ii.352000000936a5.fastq.gz FastQC Report

Summary

Basic Statistics
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Adapter Content
Kmer Content

Basic Statistics

Measure	Value
Filename	CA4RDACXX_l07n02_input_root_ctrl_rep1_pol-ii.352000000936a5.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	7342823
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base sequence quality

Per base quality graph

Per tile sequence quality

Per base quality graph

Per sequence quality scores

Per Sequence quality graph

Per base sequence content

Per base sequence content

Per sequence GC content

Per sequence GC content graph

Per base N content

N content graph

Sequence Length Distribution

Sequence length distribution

Sequence Duplication Levels

Duplication level graph

Overrepresented sequences

No overrepresented sequences

Adapter Content

Adapter graph

Kmer Content

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCGTGTA	2880	0.0	6.4830894	45
AGAGCGT	6150	0.0	6.474326	45
GAGCGTC	5550	0.0	6.363603	45
CGTGTAG	2375	0.0	6.061956	45
GCGTCGT	5030	0.0	5.9928474	45
GTCGTGT	3105	0.0	5.868322	44
AGCGTCG	5145	0.0	5.771372	44
GAAGAGC	9270	0.0	5.4600825	45
AAGAGCG	7335	0.0	5.4589653	44
GTAGGGA	1565	3.6379788E-12	5.3183618	44
GATCGGA	15935	0.0	5.3080153	45
GTGTAGG	2175	0.0	5.274816	45
CGTCGTG	4590	0.0	5.244058	45
TCGGAAG	12440	0.0	5.171804	45
TGTAGGG	1805	0.0	5.10979	45
CTTCCGA	1520	2.4738256E-10	5.0327535	9