CA4RDACXX_l07n01_input_root_ctrl_rep2_pol-ii.351000000936eb.fastq.gz FastQC Report

Summary

Basic Statistics
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Adapter Content
Kmer Content

Basic Statistics

Measure	Value
Filename	CA4RDACXX_l07n01_input_root_ctrl_rep2_pol-ii.351000000936eb.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	18212069
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base sequence quality

Per base quality graph

Per tile sequence quality

Per base quality graph

Per sequence quality scores

Per Sequence quality graph

Per base sequence content

Per base sequence content

Per sequence GC content

Per sequence GC content graph

Per base N content

N content graph

Sequence Length Distribution

Sequence length distribution

Sequence Duplication Levels

Duplication level graph

Overrepresented sequences

No overrepresented sequences

Adapter Content

Adapter graph

Kmer Content

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CACACGT	6385	0.0	6.3783803	45
ACACGTC	4770	0.0	6.3680744	45
AGAGCAC	12475	0.0	6.3308105	45
AGCACAC	10020	0.0	5.905828	45
ATCGGAA	25485	0.0	5.8712387	45
GCACACG	8500	0.0	5.770724	45
ACGTCTG	2755	0.0	5.717013	45
GAAGAGC	17005	0.0	5.6234784	45
CACGTCT	4360	0.0	5.573526	45
GAGCACA	10970	0.0	5.394236	44
AGATCGG	34365	0.0	5.2838435	45
AAGAGCA	16125	0.0	5.260589	45
CGGAAGA	21965	0.0	5.2448306	45
TCGGAAG	22565	0.0	5.205086	45
GGAAGAG	22465	0.0	5.1280975	45
GATCGGA	29600	0.0	5.092886	44