Basic Statistics
Measure | Value |
---|---|
Filename | CA4RDACXX_l07n01_chip_root_ctrl_rep2_pol-ii.35100000093508.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 10716138 |
Sequences flagged as poor quality | 0 |
Sequence length | 51 |
%GC | 51 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CGTCTGA | 1770 | 0.0 | 7.119 | 45 |
ACGTCTG | 2165 | 0.0 | 6.44374 | 45 |
CACACGT | 4145 | 0.0 | 5.917063 | 45 |
AGAGCAC | 7995 | 0.0 | 5.9102387 | 45 |
ACACGTC | 3250 | 0.0 | 5.6079726 | 45 |
GAGCACA | 7275 | 0.0 | 5.5672884 | 45 |
ATCGGAA | 15375 | 0.0 | 5.4149046 | 45 |
AGCACAC | 6565 | 0.0 | 5.278253 | 45 |
TCGGAAG | 14335 | 0.0 | 5.2269793 | 45 |
AAGAGCA | 10045 | 0.0 | 5.219275 | 45 |
GATCGGA | 18365 | 0.0 | 5.1336627 | 45 |
GAAGAGC | 10765 | 0.0 | 5.0165067 | 45 |