FastQCFastQC Report
Mon 3 Jul 2017
CA4RDACXX_l06n02_input_shoot_ctrl_rep1_h3k18ac_06-18-17.35200000093661.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameCA4RDACXX_l06n02_input_shoot_ctrl_rep1_h3k18ac_06-18-17.35200000093661.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17318077
Sequences flagged as poor quality0
Sequence length51
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTTCCGA37300.013.6942579
CCGATCT43750.012.08491312
TTCCGAT42550.012.055778510
CGTGTGC43350.011.69076251
TCCGATC45550.011.16265511
TCTTCCG52800.010.1022938
GTGCTCT52950.09.8661374
TGTGCTC55800.09.6045983
GTGTGCT57000.09.3253242
GCTCTTC61600.08.4404026
TGCTCTT81050.06.5558295
CGATCTA33950.05.89802313
CTCTTCC94900.05.8341077
Produced by FastQC (version 0.11.2)