CA4RDACXX_l06n02_chip_root_ctrl_rep2_h3k18ac_06-18-17.352000000935b2.fastq.gz FastQC Report

Summary

Basic Statistics
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Adapter Content
Kmer Content

Basic Statistics

Measure	Value
Filename	CA4RDACXX_l06n02_chip_root_ctrl_rep2_h3k18ac_06-18-17.352000000935b2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	11169064
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base sequence quality

Per base quality graph

Per tile sequence quality

Per base quality graph

Per sequence quality scores

Per Sequence quality graph

Per base sequence content

Per base sequence content

Per sequence GC content

Per sequence GC content graph

Per base N content

N content graph

Sequence Length Distribution

Sequence length distribution

Sequence Duplication Levels

Duplication level graph

Overrepresented sequences

No overrepresented sequences

Adapter Content

Adapter graph

Kmer Content

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TTCCGAT	2670	0.0	12.30266	10
TCCGATC	3190	0.0	10.790816	11
CTTCCGA	2965	0.0	10.776397	9
CCGATCT	3315	0.0	9.705235	12
GTGTGCT	3765	0.0	8.973349	2
CGTGTGC	3655	0.0	8.935696	1
GTGCTCT	3690	0.0	8.909465	4
TGTGCTC	3685	0.0	8.677361	3
TCTTCCG	4405	0.0	7.4595757	8
GCTCTTC	4575	0.0	7.232037	6
TGCTCTT	5425	0.0	6.2666316	5
TCGGAAG	5785	0.0	5.327436	45
AGAGCGT	2750	0.0	5.1535783	45
CGATCTA	1850	0.0	5.1077676	13
GATCGGA	7125	0.0	5.0201106	45
AGATCGG	8230	0.0	5.002099	45