FastQCFastQC Report
Mon 3 Jul 2017
CA4RDACXX_l06n01_chip_root_ctrl_rep3_h3k18ac_06-18-17.35100000093614.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameCA4RDACXX_l06n01_chip_root_ctrl_rep3_h3k18ac_06-18-17.35100000093614.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11349286
Sequences flagged as poor quality0
Sequence length51
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGAA104500.06.15801345
TCGGAAG95600.05.789860245
ACACGTC24200.05.671596545
AGATCGG143150.05.296993345
CACGTCT22850.05.21891945
GATCGGA124300.05.15896644
AGAGCAC60350.05.145086345
Produced by FastQC (version 0.11.2)