FastQCFastQC Report
Mon 3 Jul 2017
CA4RDACXX_l05n02_chip_shoot_ctrl_rep1_h2az_05-26-17.3520000009339b.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameCA4RDACXX_l05n02_chip_shoot_ctrl_rep1_h2az_05-26-17.3520000009339b.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22807831
Sequences flagged as poor quality0
Sequence length51
%GC52

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTAGGGA114000.010.34073245
TAGGGAA91900.09.03307645
TGTAGGG143500.08.85770845
GTGTAGG181450.07.72424245
CGTGTAG218300.07.657022545
TCGTGTA248550.06.97855445
AGGGAAA115200.06.50304245
GGGAAAG89950.06.5027545
GTCGTGT300000.06.269167445
CGTCGTG396300.05.585934645
GCGTCGT440100.05.091214744
GAGCGTC511350.05.04626445
Produced by FastQC (version 0.11.2)