CA4RDACXX_l05n01_input_root_ctrl_h2az_05-26-17.351000000936b4.fastq.gz FastQC Report

Summary

Basic Statistics
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Adapter Content
Kmer Content

Basic Statistics

Measure	Value
Filename	CA4RDACXX_l05n01_input_root_ctrl_h2az_05-26-17.351000000936b4.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	30436708
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base sequence quality

Per base quality graph

Per tile sequence quality

Per base quality graph

Per sequence quality scores

Per Sequence quality graph

Per base sequence content

Per base sequence content

Per sequence GC content

Per sequence GC content graph

Per base N content

N content graph

Sequence Length Distribution

Sequence length distribution

Sequence Duplication Levels

Duplication level graph

Overrepresented sequences

No overrepresented sequences

Adapter Content

Adapter graph

Kmer Content

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACACGTC	8570	0.0	7.193985	45
ACGTCTG	5295	0.0	6.7991366	45
AGAGCAC	21560	0.0	5.9696245	45
CACACGT	11605	0.0	5.7973003	45
CACGTCT	7650	0.0	5.794348	45
GCACACG	14775	0.0	5.7718024	45
TCGGAAG	39570	0.0	5.748901	45
CGTCTGA	4680	0.0	5.6733017	45
ATCGGAA	44660	0.0	5.6428576	45
GATCGGA	52230	0.0	5.58322	45
GAGCACA	19380	0.0	5.5149245	45
AAGAGCA	28300	0.0	5.4383783	45
GAAGAGC	29220	0.0	5.4134593	45
CGGAAGA	37525	0.0	5.336654	45
AGATCGG	60285	0.0	5.2141905	45
AGCACAC	17210	0.0	5.1512794	45