Basic Statistics
Measure | Value |
---|---|
Filename | CA4RDACXX_l05n01_chip_shoot_ctrl_rep1_h2az_05-26-17.3510000009339e.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 22807831 |
Sequences flagged as poor quality | 0 |
Sequence length | 51 |
%GC | 52 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TCTGAAC | 12750 | 0.0 | 9.000359 | 45 |
GTCTGAA | 15270 | 0.0 | 8.517039 | 45 |
CGTCTGA | 17145 | 0.0 | 8.281169 | 45 |
ACGTCTG | 20710 | 0.0 | 7.8117557 | 45 |
CTGAACT | 11670 | 0.0 | 7.423175 | 45 |
TGAACTC | 10720 | 0.0 | 7.136479 | 45 |
CACGTCT | 25190 | 0.0 | 6.931598 | 45 |
GAACTCC | 8745 | 0.0 | 6.458233 | 45 |
ACACGTC | 29100 | 0.0 | 6.410049 | 45 |
CACACGT | 34205 | 0.0 | 6.288805 | 45 |
GCACACG | 40885 | 0.0 | 5.3437543 | 44 |
AACTCCA | 8435 | 0.0 | 5.0950456 | 45 |
GAGCACA | 50780 | 0.0 | 5.0514026 | 45 |