Basic Statistics
Measure | Value |
---|---|
Filename | CA4RDACXX_l04n01_chip_root_ctrl_rep2_h3k4me3.35100000093572.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 12566729 |
Sequences flagged as poor quality | 0 |
Sequence length | 51 |
%GC | 56 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TCTGAAC | 6520 | 0.0 | 7.764868 | 45 |
GTCTGAA | 7735 | 0.0 | 7.737853 | 45 |
CGTCTGA | 8930 | 0.0 | 7.508686 | 45 |
CTGAACT | 5975 | 0.0 | 7.381036 | 45 |
ACGTCTG | 10535 | 0.0 | 7.048206 | 45 |
CACGTCT | 12460 | 0.0 | 6.699695 | 45 |
ACACGTC | 14705 | 0.0 | 6.166506 | 45 |
GAACTCC | 5190 | 0.0 | 6.069597 | 45 |
CACACGT | 16550 | 0.0 | 5.9413157 | 45 |
TGAACTC | 5860 | 0.0 | 5.6060166 | 45 |
ACTCCAG | 3450 | 0.0 | 5.4784703 | 45 |
AGCACAC | 22425 | 0.0 | 5.2577267 | 45 |
GCACACG | 20975 | 0.0 | 5.2242765 | 45 |
GAGCACA | 25265 | 0.0 | 5.0585747 | 45 |