Basic Statistics
Measure | Value |
---|---|
Filename | CA4RDACXX_l04n01_chip_root_ctrl_rep1_h3k4me3.35100000093515.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 12225570 |
Sequences flagged as poor quality | 0 |
Sequence length | 51 |
%GC | 58 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GTCTGAA | 7185 | 0.0 | 8.111177 | 45 |
TCTGAAC | 6025 | 0.0 | 8.104264 | 45 |
CGTCTGA | 8085 | 0.0 | 7.4587436 | 45 |
ACGTCTG | 9540 | 0.0 | 6.698551 | 45 |
CTGAACT | 5520 | 0.0 | 6.196057 | 45 |
CACGTCT | 11200 | 0.0 | 6.147723 | 45 |
CACACGT | 14340 | 0.0 | 6.009807 | 45 |
GAACTCC | 5470 | 0.0 | 5.9236045 | 45 |
ACTCCAG | 3305 | 0.0 | 5.650899 | 45 |
TGAACTC | 5510 | 0.0 | 5.5535383 | 44 |
ACACGTC | 12845 | 0.0 | 5.3775783 | 44 |
AGCACAC | 19915 | 0.0 | 5.220025 | 45 |
GCACACG | 18315 | 0.0 | 5.061756 | 45 |
AACTCCA | 4050 | 0.0 | 5.055886 | 45 |