FastQCFastQC Report
Mon 3 Jul 2017
CA4RDACXX_l02n02_atac_control_1h_rep2_root_06-21-17.352000000932a9.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameCA4RDACXX_l02n02_atac_control_1h_rep2_root_06-21-17.352000000932a9.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7425551
Sequences flagged as poor quality0
Sequence length51
%GC66

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACTAGAC600.006482624418.7655743
CTCTTAA1951.8189894E-1218.4588345
TTCAATA952.801406E-416.5948432
TAGACAG1401.2488345E-616.0814175
TACACAG1351.5745833E-515.0093235
TCTGACG98450.014.80737745
TATACAC650600.014.633574545
GTACAAA1251.3698223E-414.4150691
GAGTGTA1605.0448125E-614.05986932
TAGCACA1453.084833E-513.9770224
TGACGCT76550.013.90063945
CCTTATA1301.9307605E-413.84412245
CATAACT1150.001195406713.7069354
ATACACA440000.013.67185845
CTCATAA1352.6335535E-413.3461162
GCGTATA1200.001644886213.1387351
CCTAGAG1902.0435327E-613.0388062
TAGGACA2959.640644E-1112.9767844
CTGACGC113650.012.88636345
CTAGAGC1403.585366E-412.8678213
Produced by FastQC (version 0.11.2)