FastQCFastQC Report
Mon 3 Jul 2017
CA4RDACXX_l02n02_atac_control_1h_rep2_root_06-15-17.352000000932f9.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameCA4RDACXX_l02n02_atac_control_1h_rep2_root_06-15-17.352000000932f9.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15313139
Sequences flagged as poor quality0
Sequence length51
%GC64

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATACAC262050.015.80434945
ATACACA171800.014.67876245
TTATACA378550.013.65632345
CCTAGAC7250.013.0465313
CTAGGAC6400.012.6679483
TATACTG6650.011.8501085
TAGACAG7000.011.5792475
CTAGACA5750.011.3580934
TACACAT116750.011.34920445
TACACCG48200.011.0707535
TCTGACG46950.011.06836245
TAAGACG5700.011.0626314
CTTATAC497650.010.794867545
CCTAGGA6300.010.7252062
TCTACAC31100.010.5000513
TTAGACT3451.5326805E-810.4442234
GTACTAT6050.010.4245521
TTATACT5650.010.363354
TAGGACA10450.010.3442784
TACACTG9800.010.33861355
Produced by FastQC (version 0.11.2)