FastQCFastQC Report
Mon 3 Jul 2017
CA4RDACXX_l02n01_atac_control_1h_rep2_root_06-21-17.351000000932ac.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameCA4RDACXX_l02n01_atac_control_1h_rep2_root_06-21-17.351000000932ac.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7425551
Sequences flagged as poor quality0
Sequence length51
%GC66

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TACACTA453.490911E-530.0031175
TATTATA2800.024.11110744
ATTATAC2850.023.69193645
TCCGAGC46250.021.80170445
ACTTATA955.522779E-721.32274245
GCTTATA1201.1035809E-820.63172745
TGTTATA1009.0542926E-720.25333244
GTCTAGA807.5433345E-519.6965771
TCTAATA706.981605E-419.28849642
CTATTAT3650.019.11234743
CTCCGAG73650.019.09991545
GTATACA1305.773327E-717.31333745
CTGTTAT1459.672476E-817.07142843
CTAATAC800.001710381416.87743643
CCTTATA1358.568659E-716.67210245
TCGTATA1501.4234683E-716.5023843
CTTACAT1104.6375368E-516.3658873
TCTATTA4450.016.18210842
CTGTCTA5050.016.03921739
TGTCTTA850.002564120315.88496444
Produced by FastQC (version 0.11.2)