FastQCFastQC Report
Mon 3 Jul 2017
CA4RDACXX_l02n01_atac_control_1h_rep2_root_06-15-17.351000000932fc.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameCA4RDACXX_l02n01_atac_control_1h_rep2_root_06-15-17.351000000932fc.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15313139
Sequences flagged as poor quality0
Sequence length51
%GC64

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATACAC258800.015.77680145
ATACACA170650.014.53520845
TTATACA370850.013.59551545
TAGACAG6250.012.6016125
GTGTAGG31200.011.9769511
CTAGACA4950.011.8200824
TATACTG7850.011.7530975
GTATAAG7850.011.4705191
TACACAT114300.011.40192745
TACACCG48300.011.2281455
GTATAGA9950.010.8595271
CTTATAC492200.010.8106545
TTACACT5250.010.7160074
TCTACAC28550.010.6408693
TAAGACA5100.010.5899364
TCTAGAC6050.010.4148283
GTCTAGG7350.010.4132021
GTTCTAG5900.010.3015961
GTCCTAA5050.010.2524861
TATACCG12650.010.1396385
Produced by FastQC (version 0.11.2)