FastQCFastQC Report
Mon 15 May 2017
C9LUHACXX_l08n02_ogla_75.3520000008ce94.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameC9LUHACXX_l08n02_ogla_75.3520000008ce94.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17362524
Sequences flagged as poor quality0
Sequence length101
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATACTG111550.016.5621285
GTGTAGG79100.014.5903581
CTATACT119300.014.3715274
GTATTGG183350.014.2727221
GTACTAG118350.014.1257171
GTATATA240400.013.750261
TTATACT141850.013.6939934
GTATAGG78550.013.4227941
TACACTG81100.013.410685
TCTATAC88500.013.3089733
TATACTC123300.013.1734395
CTACACT79100.012.9692074
ATACTGT114400.012.9528326
GTATATG158300.012.7809991
TAGACTG49150.012.7551785
GTATTAG93200.012.6887711
CCTATAC87300.012.6214683
GTACTAT116150.012.5941141
TATACCG57750.012.582755
GTGTATG122300.012.50447751
Produced by FastQC (version 0.11.2)