FastQCFastQC Report
Mon 15 May 2017
C9LUHACXX_l08n02_ogla_69.3520000008d0ac.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameC9LUHACXX_l08n02_ogla_69.3520000008d0ac.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences36411131
Sequences flagged as poor quality0
Sequence length101
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATACTG200000.016.0299995
GTATATA404950.015.2241911
CTATACT199250.015.0176494
TATACAG166750.014.95385555
TATACCG93000.014.6574585
GTATAGG130700.014.6450341
CCTATAC129550.014.555063
GTATAAG145400.014.4710561
GTATTGG311750.014.4279431
GTATTAT244450.014.3587071
GTATTAG162450.013.9755551
ATAATAC250100.013.9583663
GTATAAT236700.013.8455991
TAATACT272150.013.3160654
TTATACT255450.013.3127214
TAGACTG103500.013.1245795
GTATAGA171500.012.96112251
TCTATAC168100.012.9124723
GTATTAA238900.012.8035561
TACACCG104100.012.68392855
Produced by FastQC (version 0.11.2)