FastQCFastQC Report
Mon 15 May 2017
C9LUHACXX_l08n01_ogla_76.3510000008ce10.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameC9LUHACXX_l08n01_ogla_76.3510000008ce10.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences24979078
Sequences flagged as poor quality0
Sequence length101
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATACTG155450.016.0409095
GTATAAG112350.014.6744271
GTATATA347250.014.5580811
GTATAGG108450.014.5449851
GTATTGG186350.014.5328311
TAGACTG77100.014.3536385
CTATACT161350.014.2771054
TATACCG76600.013.8892785
TACACTG108100.013.7524185
CCTATAC106700.013.3989093
GTATTAT186450.013.352841
TTATACT194950.013.3513364
TAATACT206350.013.3272784
ACTGTGC109650.013.1676938
TCTATAC125050.012.9900193
TATACAG136950.012.9362155
GTATAGA132100.012.8761191
GTATAAT179050.012.630991
ATTATAC179100.012.6234693
GTGTATG157950.012.2427661
Produced by FastQC (version 0.11.2)