FastQCFastQC Report
Mon 15 May 2017
C9LUHACXX_l08n01_ogla_75.3510000008ce97.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameC9LUHACXX_l08n01_ogla_75.3510000008ce97.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17362524
Sequences flagged as poor quality0
Sequence length101
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATACTG113200.016.0281125
GTATTGG186350.014.8132311
CTACACT79150.014.58237654
TACACTG78350.014.5491535
GTACTAG122050.014.5202511
CTATACT119050.014.2433394
GTGTAGG82400.013.9537591
GTACTAT117700.013.5633171
TTATACT144900.013.5380044
GTATATA242750.013.3875141
TATTGGG202100.013.1851352
GTCTTAG55650.013.1479681
TGCGTTC143450.013.1113189
GTATAAG80150.012.9820611
GTATAGG80050.012.9389261
GTATTAG96750.012.8662911
GTGTATG123650.012.795381
GTCCTAG61850.012.7517991
CCTATAC83950.012.6736093
TATACCG53700.012.6481565
Produced by FastQC (version 0.11.2)