FastQCFastQC Report
Mon 15 May 2017
C9LUHACXX_l08n01_ogla_71.3510000008d028.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameC9LUHACXX_l08n01_ogla_71.3510000008d028.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences28416542
Sequences flagged as poor quality0
Sequence length101
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATACTG181950.018.3511775
GTATAGG122750.014.9796161
GTATATA379250.014.6954741
TATACCG94050.014.6453525
GTATTGG256250.014.55516051
TATACAG169000.014.13655
GTATAAG131250.014.0095071
TTATACT221750.013.9225254
CTATACT190150.013.8632474
TAGACTG91100.013.7119125
CCTATAC124300.013.3359083
GTATTAT210650.013.2851071
TCTATAC145300.013.2717653
ATACTGT186050.013.1980126
GTATAGA155750.013.0259981
TAATACT229400.012.8992044
GTCTAGG95300.012.8130181
TATATAC377100.012.7843243
ATTATAC203450.012.7702063
ATAATAC213700.012.7133433
Produced by FastQC (version 0.11.2)