FastQCFastQC Report
Mon 15 May 2017
C9LUHACXX_l08n01_ogla_69.3510000008d0af.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameC9LUHACXX_l08n01_ogla_69.3510000008d0af.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences36411131
Sequences flagged as poor quality0
Sequence length101
%GC44

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATACTG195800.017.5141145
GTATAGG129800.017.0946791
TATACCG98400.015.9770485
GTATATA409400.015.6212571
CCTATAC133150.015.1963893
GTATAAG142650.015.1217781
CTATACT190200.014.9585094
GTATTGG310500.014.8279441
TACACTG140700.014.2793995
TATACAG172900.014.2023165
GTATTAT248250.014.1440561
TTATACT248550.014.12221054
GTATAGA170250.014.0936351
TCTATAC163650.013.496123
GTATTAA232100.013.36770251
TAATACT271350.013.2856854
ATAATAC243650.013.1001083
TACACAG126650.013.05081755
TATACTA283400.012.8043385
ACTGTGC134850.012.7496088
Produced by FastQC (version 0.11.2)