FastQCFastQC Report
Mon 15 May 2017
C9LUHACXX_l05n02_ogla_105.3520000008cd7b.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameC9LUHACXX_l05n02_ogla_105.3520000008cd7b.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16429835
Sequences flagged as poor quality0
Sequence length101
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATACCG53000.017.1159975
GTATAAG74950.016.7927931
TATACTG108150.016.160925
GTATTGG131500.015.1695351
GTATAGG72600.015.0466531
TACACCG52700.014.6899975
TAGACTG52350.014.5160365
TATACAG94850.014.2709295
CTATACT106350.013.9335514
GTATATA237800.013.9209741
CCTATAC71500.013.8831383
ACAGTGC76450.013.8530588
TACACAG68850.013.7965595
GTCTAGG55700.013.7283831
GTCTTAG47900.013.4850351
ACTGTGC68750.013.3322338
GTGTAGG69250.013.2368981
TACACTG72350.013.1947835
GTATAGA92450.013.0489471
GTGTATG105350.012.9839441
Produced by FastQC (version 0.11.2)