FastQCFastQC Report
Mon 15 May 2017
C9LUHACXX_l05n01_ogla_105.3510000008cd7e.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameC9LUHACXX_l05n01_ogla_105.3510000008cd7e.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16429835
Sequences flagged as poor quality0
Sequence length101
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATACTG107800.017.138945
GTATAAG76100.015.3583671
TATACCG52300.015.3475185
GTATTGG138400.015.0703381
CTATACT106400.014.9546014
GTATAGG74500.014.7316111
ACTGTGC70550.014.6083998
GTATATA236150.014.6064021
TAGACTG51150.014.4854545
TCTATAC86350.014.1366033
CCTAGAC51000.013.8768333
GTCTAGG58450.013.8184391
CCTACAC68450.013.8087343
TACACCG53000.013.6213715
TATACAG92700.013.5774835
TACACTG72850.013.4956535
TTATACT126800.013.4851234
GTGTAGG68800.013.4660651
GTATAGA92250.013.3906471
TGCGTTC94350.013.3396339
Produced by FastQC (version 0.11.2)